Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Best1O88870 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Best1O88870 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Best1O88870 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Best1O88870 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.53■□□□□ 0.08
Best1O88870 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Best1O88870 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Best1O88870 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Best1O88870 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Best1O88870 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 Gm25990-201ENSMUST00000102440 86 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.52■□□□□ 0.08
Best1O88870 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.52■□□□□ 0.08
Best1O88870 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm18733-201ENSMUST00000173950 856 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm8825-201ENSMUST00000182565 998 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm4518-201ENSMUST00000182638 718 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.52■□□□□ 0.08
Best1O88870 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.52■□□□□ 0.08
Best1O88870 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.52■□□□□ 0.08
Best1O88870 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Best1O88870 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.52■□□□□ 0.08
Best1O88870 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.52■□□□□ 0.08
Best1O88870 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Best1O88870 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.51■□□□□ 0.07
Best1O88870 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.51■□□□□ 0.07
Best1O88870 Gm44771-201ENSMUST00000206975 626 ntBASIC15.51■□□□□ 0.07
Best1O88870 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.51■□□□□ 0.07
Best1O88870 Gm10060-201ENSMUST00000212002 111 ntBASIC15.51■□□□□ 0.07
Best1O88870 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.51■□□□□ 0.07
Best1O88870 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Best1O88870 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Best1O88870 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.51■□□□□ 0.07
Best1O88870 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Best1O88870 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.51■□□□□ 0.07
Best1O88870 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms