Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldn1O88551 Gm2756-201ENSMUST00000195851 400 ntBASIC13.87□□□□□ -0.19
Cldn1O88551 Gm29707-201ENSMUST00000196325 491 ntBASIC13.87□□□□□ -0.19
Cldn1O88551 Gm18421-201ENSMUST00000204122 625 ntBASIC13.87□□□□□ -0.19
Cldn1O88551 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cldn1O88551 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.87□□□□□ -0.19
Cldn1O88551 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Cldn1O88551 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cldn1O88551 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn1O88551 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Cldn1O88551 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.85□□□□□ -0.19
Cldn1O88551 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cldn1O88551 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Gm14494-201ENSMUST00000118786 435 ntBASIC13.85□□□□□ -0.19
Cldn1O88551 Gm14822-201ENSMUST00000122247 291 ntBASIC13.85□□□□□ -0.19
Cldn1O88551 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cldn1O88551 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cldn1O88551 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.85□□□□□ -0.19
Cldn1O88551 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.85□□□□□ -0.19
Cldn1O88551 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cldn1O88551 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.85□□□□□ -0.19
Cldn1O88551 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn1O88551 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cldn1O88551 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.84□□□□□ -0.19
Cldn1O88551 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms