Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ttc3O88196 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.91■□□□□ 0.3
Ttc3O88196 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.91■□□□□ 0.3
Ttc3O88196 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.91■□□□□ 0.3
Ttc3O88196 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.91■□□□□ 0.3
Ttc3O88196 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.91■□□□□ 0.3
Ttc3O88196 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.91■□□□□ 0.3
Ttc3O88196 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ttc3O88196 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Gm12260-201ENSMUST00000122447 411 ntBASIC16.9■□□□□ 0.3
Ttc3O88196 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ttc3O88196 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.9■□□□□ 0.3
Ttc3O88196 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ttc3O88196 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.9■□□□□ 0.3
Ttc3O88196 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.89■□□□□ 0.3
Ttc3O88196 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.89■□□□□ 0.3
Ttc3O88196 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.89■□□□□ 0.3
Ttc3O88196 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ttc3O88196 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.89■□□□□ 0.29
Ttc3O88196 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.89■□□□□ 0.29
Ttc3O88196 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.89■□□□□ 0.29
Ttc3O88196 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ttc3O88196 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ttc3O88196 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ttc3O88196 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm11764-201ENSMUST00000120221 623 ntBASIC16.88■□□□□ 0.29
Ttc3O88196 Gm6257-201ENSMUST00000163864 910 ntBASIC16.88■□□□□ 0.29
Ttc3O88196 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.88■□□□□ 0.29
Ttc3O88196 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.88■□□□□ 0.29
Ttc3O88196 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ttc3O88196 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm11594-201ENSMUST00000122313 162 ntBASIC16.88■□□□□ 0.29
Ttc3O88196 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.88■□□□□ 0.29
Ttc3O88196 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.88■□□□□ 0.29
Ttc3O88196 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.88■□□□□ 0.29
Ttc3O88196 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.88■□□□□ 0.29
Ttc3O88196 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.88■□□□□ 0.29
Ttc3O88196 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ttc3O88196 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ttc3O88196 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ttc3O88196 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ttc3O88196 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms