Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ank2-226ENSMUST00000189368 339 ntBASIC15.99■□□□□ 0.15
Pdlim1O70400 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.99■□□□□ 0.15
Pdlim1O70400 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.99■□□□□ 0.15
Pdlim1O70400 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pdlim1O70400 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim1O70400 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.98■□□□□ 0.15
Pdlim1O70400 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim1O70400 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim1O70400 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pdlim1O70400 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Gm15372-201ENSMUST00000120729 834 ntBASIC15.97■□□□□ 0.15
Pdlim1O70400 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Gm18669-201ENSMUST00000216049 778 ntBASIC15.97■□□□□ 0.15
Pdlim1O70400 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim1O70400 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim1O70400 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.96■□□□□ 0.15
Pdlim1O70400 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Mir6404-201ENSMUST00000183699 94 ntBASIC15.96■□□□□ 0.15
Pdlim1O70400 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim1O70400 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.96■□□□□ 0.15
Pdlim1O70400 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.96■□□□□ 0.15
Pdlim1O70400 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim1O70400 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim1O70400 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim1O70400 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim1O70400 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms