Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.71□□□□□ -0.05
Pdlim3O70209 Timm23-208ENSMUST00000226683 750 ntBASIC14.71□□□□□ -0.05
Pdlim3O70209 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim3O70209 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim3O70209 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim3O70209 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.7□□□□□ -0.06
Pdlim3O70209 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.7□□□□□ -0.06
Pdlim3O70209 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim3O70209 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pdlim3O70209 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim3O70209 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim3O70209 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Phf7-203ENSMUST00000226565 1971 ntBASIC14.69□□□□□ -0.06
Pdlim3O70209 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim3O70209 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.69□□□□□ -0.06
Pdlim3O70209 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.69□□□□□ -0.06
Pdlim3O70209 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.69□□□□□ -0.06
Pdlim3O70209 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.69□□□□□ -0.06
Pdlim3O70209 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim3O70209 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.68□□□□□ -0.06
Pdlim3O70209 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Mir1199-201ENSMUST00000117015 119 ntBASIC14.68□□□□□ -0.06
Pdlim3O70209 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.68□□□□□ -0.06
Pdlim3O70209 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms