Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Rdh5O55240 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.38■□□□□ 0.05
Rdh5O55240 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh5O55240 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rdh5O55240 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.37■□□□□ 0.05
Rdh5O55240 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.37■□□□□ 0.05
Rdh5O55240 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.37■□□□□ 0.05
Rdh5O55240 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.37■□□□□ 0.05
Rdh5O55240 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.37■□□□□ 0.05
Rdh5O55240 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rdh5O55240 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rdh5O55240 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.37■□□□□ 0.05
Rdh5O55240 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rdh5O55240 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rdh5O55240 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Gm14859-201ENSMUST00000117752 357 ntBASIC15.36■□□□□ 0.05
Rdh5O55240 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.36■□□□□ 0.05
Rdh5O55240 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rdh5O55240 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.36■□□□□ 0.05
Rdh5O55240 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rdh5O55240 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.36■□□□□ 0.05
Rdh5O55240 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.36■□□□□ 0.05
Rdh5O55240 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.36■□□□□ 0.05
Rdh5O55240 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rdh5O55240 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rdh5O55240 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rdh5O55240 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.35■□□□□ 0.05
Rdh5O55240 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Mir770-201ENSMUST00000103252 94 ntBASIC15.35■□□□□ 0.05
Rdh5O55240 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.35■□□□□ 0.05
Rdh5O55240 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.35■□□□□ 0.05
Rdh5O55240 Gm9013-201ENSMUST00000132939 882 ntBASIC15.35■□□□□ 0.05
Rdh5O55240 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.35■□□□□ 0.05
Rdh5O55240 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Rdh5O55240 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rdh5O55240 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rdh5O55240 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rdh5O55240 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rdh5O55240 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Rdh5O55240 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms