Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.15■□□□□ 0.34
Pja1O55176 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pja1O55176 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pja1O55176 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.14■□□□□ 0.33
Pja1O55176 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.14■□□□□ 0.33
Pja1O55176 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.14■□□□□ 0.33
Pja1O55176 Gm29707-201ENSMUST00000196325 491 ntBASIC17.14■□□□□ 0.33
Pja1O55176 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.14■□□□□ 0.33
Pja1O55176 Gm10566-201ENSMUST00000086739 996 ntBASIC17.14■□□□□ 0.33
Pja1O55176 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pja1O55176 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.14■□□□□ 0.33
Pja1O55176 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pja1O55176 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pja1O55176 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.13■□□□□ 0.33
Pja1O55176 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.13■□□□□ 0.33
Pja1O55176 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.13■□□□□ 0.33
Pja1O55176 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pja1O55176 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pja1O55176 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pja1O55176 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.11■□□□□ 0.33
Pja1O55176 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Pja1O55176 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.11■□□□□ 0.33
Pja1O55176 Gm11336-201ENSMUST00000118168 334 ntBASIC17.11■□□□□ 0.33
Pja1O55176 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pja1O55176 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pja1O55176 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.11■□□□□ 0.33
Pja1O55176 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pja1O55176 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pja1O55176 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.11■□□□□ 0.33
Pja1O55176 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pja1O55176 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pja1O55176 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms