Protein–RNA interactions for Protein: O55125

Nipsnap1, Protein NipSnap homolog 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap1O55125 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap1O55125 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Trmt13-210ENSMUST00000198454 880 ntBASIC14.09□□□□□ -0.15
Nipsnap1O55125 Gm9731-201ENSMUST00000209480 747 ntBASIC14.09□□□□□ -0.15
Nipsnap1O55125 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap1O55125 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap1O55125 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap1O55125 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap1O55125 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Gm37856-201ENSMUST00000191634 999 ntBASIC14.07□□□□□ -0.16
Nipsnap1O55125 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.07□□□□□ -0.16
Nipsnap1O55125 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.07□□□□□ -0.16
Nipsnap1O55125 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nipsnap1O55125 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nipsnap1O55125 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms