Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm4459-201ENSMUST00000118750 468 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm4535-201ENSMUST00000182274 558 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm2651-201ENSMUST00000203560 838 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm6443-201ENSMUST00000203599 874 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm10355-201ENSMUST00000097146 517 ntBASIC13.68□□□□□ -0.22
Cxcl13O55038 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl13O55038 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl13O55038 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.67□□□□□ -0.22
Cxcl13O55038 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Mir6404-201ENSMUST00000183699 94 ntBASIC13.67□□□□□ -0.22
Cxcl13O55038 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.67□□□□□ -0.22
Cxcl13O55038 Gm43514-201ENSMUST00000198852 424 ntBASIC13.67□□□□□ -0.22
Cxcl13O55038 Gm10060-201ENSMUST00000212002 111 ntBASIC13.67□□□□□ -0.22
Cxcl13O55038 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl13O55038 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cxcl13O55038 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Cxcl13O55038 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl13O55038 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl13O55038 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm8097-201ENSMUST00000117903 829 ntBASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm13418-201ENSMUST00000119097 944 ntBASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.65□□□□□ -0.22
Cxcl13O55038 Mir5131-201ENSMUST00000175426 93 ntBASIC13.65□□□□□ -0.22
Cxcl13O55038 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm8655-201ENSMUST00000221159 852 ntBASIC13.65□□□□□ -0.22
Cxcl13O55038 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl13O55038 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl13O55038 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms