Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.27■□□□□ 0.36
Kcnu1O54982 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Kcnu1O54982 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.27■□□□□ 0.36
Kcnu1O54982 Gm11355-201ENSMUST00000121120 306 ntBASIC17.27■□□□□ 0.36
Kcnu1O54982 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.27■□□□□ 0.36
Kcnu1O54982 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Kcnu1O54982 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Kcnu1O54982 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Kcnu1O54982 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.27■□□□□ 0.35
Kcnu1O54982 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Kcnu1O54982 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Kcnu1O54982 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Kcnu1O54982 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.26■□□□□ 0.35
Kcnu1O54982 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.26■□□□□ 0.35
Kcnu1O54982 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.26■□□□□ 0.35
Kcnu1O54982 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.26■□□□□ 0.35
Kcnu1O54982 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Kcnu1O54982 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Kcnu1O54982 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Kcnu1O54982 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Kcnu1O54982 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Kcnu1O54982 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
Kcnu1O54982 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Kcnu1O54982 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Kcnu1O54982 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.24■□□□□ 0.35
Kcnu1O54982 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Kcnu1O54982 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.24■□□□□ 0.35
Kcnu1O54982 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Kcnu1O54982 Gm10231-201ENSMUST00000181584 441 ntBASIC17.24■□□□□ 0.35
Kcnu1O54982 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Gm10175-202ENSMUST00000208752 441 ntBASIC17.24■□□□□ 0.35
Kcnu1O54982 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Prob1-201ENSMUST00000097619 3021 ntBASIC17.24■□□□□ 0.35
Kcnu1O54982 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Kcnu1O54982 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms