Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarce1O54941 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarce1O54941 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarce1O54941 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.28■□□□□ 0.68
Smarce1O54941 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarce1O54941 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarce1O54941 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Gm5417-201ENSMUST00000079706 384 ntBASIC19.28■□□□□ 0.68
Smarce1O54941 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarce1O54941 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarce1O54941 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarce1O54941 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarce1O54941 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.27■□□□□ 0.68
Smarce1O54941 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Smarce1O54941 Gm11336-201ENSMUST00000118168 334 ntBASIC19.27■□□□□ 0.68
Smarce1O54941 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Smarce1O54941 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.27■□□□□ 0.68
Smarce1O54941 Gm7213-201ENSMUST00000215977 950 ntBASIC19.27■□□□□ 0.68
Smarce1O54941 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Smarce1O54941 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarce1O54941 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Smarce1O54941 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smarce1O54941 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.27■□□□□ 0.67
Smarce1O54941 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarce1O54941 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.27■□□□□ 0.67
Smarce1O54941 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarce1O54941 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.26■□□□□ 0.67
Smarce1O54941 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarce1O54941 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.26■□□□□ 0.67
Smarce1O54941 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Gm30025-201ENSMUST00000218555 728 ntBASIC19.26■□□□□ 0.67
Smarce1O54941 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Smarce1O54941 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarce1O54941 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarce1O54941 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smarce1O54941 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarce1O54941 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarce1O54941 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.25■□□□□ 0.67
Smarce1O54941 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarce1O54941 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.25■□□□□ 0.67
Smarce1O54941 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarce1O54941 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarce1O54941 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarce1O54941 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.25■□□□□ 0.67
Smarce1O54941 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarce1O54941 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarce1O54941 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarce1O54941 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms