Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Asic1-205ENSMUST00000228185 1818 ntBASIC18.24■□□□□ 0.51
Stx1aO35526 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Stx1aO35526 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Stx1aO35526 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stx1aO35526 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Odf3b-204ENSMUST00000227834 930 ntBASIC18.23■□□□□ 0.51
Stx1aO35526 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stx1aO35526 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stx1aO35526 App-207ENSMUST00000227737 2827 ntBASIC18.22■□□□□ 0.51
Stx1aO35526 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Stx1aO35526 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Stx1aO35526 Gm44450-201ENSMUST00000199528 114 ntBASIC18.22■□□□□ 0.51
Stx1aO35526 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stx1aO35526 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.21■□□□□ 0.51
Stx1aO35526 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.21■□□□□ 0.51
Stx1aO35526 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Stx1aO35526 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.21■□□□□ 0.51
Stx1aO35526 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.21■□□□□ 0.51
Stx1aO35526 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.21■□□□□ 0.51
Stx1aO35526 Gm36967-201ENSMUST00000193814 266 ntBASIC18.21■□□□□ 0.51
Stx1aO35526 Gm3375-201ENSMUST00000203929 796 ntBASIC18.21■□□□□ 0.51
Stx1aO35526 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.21■□□□□ 0.51
Stx1aO35526 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.21■□□□□ 0.51
Stx1aO35526 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stx1aO35526 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Stx1aO35526 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Stx1aO35526 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Stx1aO35526 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stx1aO35526 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Stx1aO35526 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stx1aO35526 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stx1aO35526 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stx1aO35526 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stx1aO35526 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stx1aO35526 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms