Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcn6O35454 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clcn6O35454 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcn6O35454 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Gm12382-201ENSMUST00000122005 922 ntBASIC17.41■□□□□ 0.38
Clcn6O35454 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Gm43183-201ENSMUST00000200632 547 ntBASIC17.41■□□□□ 0.38
Clcn6O35454 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.41■□□□□ 0.38
Clcn6O35454 Gm19253-201ENSMUST00000204279 307 ntBASIC17.41■□□□□ 0.38
Clcn6O35454 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.41■□□□□ 0.38
Clcn6O35454 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clcn6O35454 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcn6O35454 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clcn6O35454 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.41■□□□□ 0.38
Clcn6O35454 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clcn6O35454 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clcn6O35454 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Gm15378-201ENSMUST00000121894 207 ntBASIC17.4■□□□□ 0.38
Clcn6O35454 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC17.4■□□□□ 0.38
Clcn6O35454 Gm17790-201ENSMUST00000191545 1228 ntBASIC17.4■□□□□ 0.38
Clcn6O35454 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC17.4■□□□□ 0.38
Clcn6O35454 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Clcn6O35454 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clcn6O35454 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Clcn6O35454 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.39■□□□□ 0.37
Clcn6O35454 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.39■□□□□ 0.37
Clcn6O35454 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clcn6O35454 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clcn6O35454 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcn6O35454 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.38■□□□□ 0.37
Clcn6O35454 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcn6O35454 AC132384.10-201ENSMUST00000217862 1204 ntBASIC17.38■□□□□ 0.37
Clcn6O35454 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms