Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.84□□□□□ -0.35
Efnb3O35393 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Efnb3O35393 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Gm18958-201ENSMUST00000174258 762 ntBASIC12.84□□□□□ -0.35
Efnb3O35393 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Gm43183-201ENSMUST00000200632 547 ntBASIC12.84□□□□□ -0.35
Efnb3O35393 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Efnb3O35393 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Efnb3O35393 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Efnb3O35393 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Efnb3O35393 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Efnb3O35393 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.83□□□□□ -0.36
Efnb3O35393 Gm10812-201ENSMUST00000099864 546 ntBASIC12.83□□□□□ -0.36
Efnb3O35393 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.83□□□□□ -0.36
Efnb3O35393 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Efnb3O35393 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.83□□□□□ -0.36
Efnb3O35393 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Efnb3O35393 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Efnb3O35393 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Efnb3O35393 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Gm10698-201ENSMUST00000182663 604 ntBASIC12.82□□□□□ -0.36
Efnb3O35393 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.82□□□□□ -0.36
Efnb3O35393 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Efnb3O35393 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Efnb3O35393 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Efnb3O35393 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.81□□□□□ -0.36
Efnb3O35393 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Efnb3O35393 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Asic1-205ENSMUST00000228185 1818 ntBASIC12.81□□□□□ -0.36
Efnb3O35393 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.81□□□□□ -0.36
Efnb3O35393 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.81□□□□□ -0.36
Efnb3O35393 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.81□□□□□ -0.36
Efnb3O35393 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Efnb3O35393 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.81□□□□□ -0.36
Efnb3O35393 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.81□□□□□ -0.36
Efnb3O35393 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms