Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Gm13216-201ENSMUST00000117145 591 ntBASIC15.23■□□□□ 0.03
Cx3cl1O35188 Gm15794-201ENSMUST00000120182 631 ntBASIC15.23■□□□□ 0.03
Cx3cl1O35188 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Gm27742-201ENSMUST00000184667 60 ntBASIC15.23■□□□□ 0.03
Cx3cl1O35188 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.23■□□□□ 0.03
Cx3cl1O35188 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cl1O35188 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cl1O35188 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.21■□□□□ 0.03
Cx3cl1O35188 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cx3cl1O35188 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cl1O35188 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.21■□□□□ 0.02
Cx3cl1O35188 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cl1O35188 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cl1O35188 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cx3cl1O35188 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.2■□□□□ 0.02
Cx3cl1O35188 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Olfr129-201ENSMUST00000122318 993 ntBASIC15.2■□□□□ 0.02
Cx3cl1O35188 Gm10052-201ENSMUST00000168019 960 ntBASIC15.2■□□□□ 0.02
Cx3cl1O35188 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.2■□□□□ 0.02
Cx3cl1O35188 Gm7729-201ENSMUST00000050143 801 ntBASIC15.2■□□□□ 0.02
Cx3cl1O35188 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cx3cl1O35188 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms