Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx4O35137 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Alx4O35137 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Alx4O35137 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Alx4O35137 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.47□□□□□ -0.09
Alx4O35137 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Alx4O35137 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Alx4O35137 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Alx4O35137 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Alx4O35137 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Alx4O35137 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Alx4O35137 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Alx4O35137 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Alx4O35137 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Alx4O35137 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.46□□□□□ -0.09
Alx4O35137 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.46□□□□□ -0.09
Alx4O35137 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.46□□□□□ -0.09
Alx4O35137 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.46□□□□□ -0.09
Alx4O35137 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.46□□□□□ -0.09
Alx4O35137 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Alx4O35137 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.46□□□□□ -0.1
Alx4O35137 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx4O35137 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx4O35137 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx4O35137 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Alx4O35137 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Alx4O35137 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Alx4O35137 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Alx4O35137 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 Gm3375-201ENSMUST00000203929 796 ntBASIC14.45□□□□□ -0.1
Alx4O35137 Gm18421-201ENSMUST00000204122 625 ntBASIC14.45□□□□□ -0.1
Alx4O35137 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.45□□□□□ -0.1
Alx4O35137 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Alx4O35137 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx4O35137 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Alx4O35137 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx4O35137 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Alx4O35137 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx4O35137 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms