Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Gfra3O35118 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Gfra3O35118 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gfra3O35118 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Rprl3-201ENSMUST00000157400 290 ntBASIC13.99□□□□□ -0.17
Gfra3O35118 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Gm34391-201ENSMUST00000203706 907 ntBASIC13.99□□□□□ -0.17
Gfra3O35118 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.99□□□□□ -0.17
Gfra3O35118 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Gfra3O35118 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Gfra3O35118 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Gfra3O35118 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Gfra3O35118 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra3O35118 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gfra3O35118 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Gfra3O35118 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.98□□□□□ -0.17
Gfra3O35118 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.98□□□□□ -0.17
Gfra3O35118 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Gfra3O35118 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.98□□□□□ -0.17
Gfra3O35118 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Gfra3O35118 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Gfra3O35118 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Gfra3O35118 Gm36967-201ENSMUST00000193814 266 ntBASIC13.98□□□□□ -0.17
Gfra3O35118 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.98□□□□□ -0.17
Gfra3O35118 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra3O35118 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gfra3O35118 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.97□□□□□ -0.17
Gfra3O35118 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.97□□□□□ -0.17
Gfra3O35118 Gm15372-201ENSMUST00000120729 834 ntBASIC13.97□□□□□ -0.17
Gfra3O35118 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Gfra3O35118 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.97□□□□□ -0.17
Gfra3O35118 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.97□□□□□ -0.17
Gfra3O35118 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Gfra3O35118 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Gfra3O35118 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra3O35118 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Gfra3O35118 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra3O35118 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms