Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.94■□□□□ 0.62
Tcof1O08784 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.94■□□□□ 0.62
Tcof1O08784 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.94■□□□□ 0.62
Tcof1O08784 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.94■□□□□ 0.62
Tcof1O08784 Gm44454-201ENSMUST00000198541 138 ntBASIC18.94■□□□□ 0.62
Tcof1O08784 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.94■□□□□ 0.62
Tcof1O08784 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcof1O08784 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tcof1O08784 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Tcof1O08784 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.93■□□□□ 0.62
Tcof1O08784 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tcof1O08784 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tcof1O08784 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tcof1O08784 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Gm15165-201ENSMUST00000118140 502 ntBASIC18.92■□□□□ 0.62
Tcof1O08784 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.92■□□□□ 0.62
Tcof1O08784 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tcof1O08784 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Tcof1O08784 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Tcof1O08784 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.92■□□□□ 0.62
Tcof1O08784 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.92■□□□□ 0.62
Tcof1O08784 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.92■□□□□ 0.62
Tcof1O08784 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.92■□□□□ 0.62
Tcof1O08784 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Tcof1O08784 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcof1O08784 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.92■□□□□ 0.62
Tcof1O08784 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
Tcof1O08784 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.91■□□□□ 0.62
Tcof1O08784 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Tcof1O08784 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.91■□□□□ 0.62
Tcof1O08784 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Gm27459-201ENSMUST00000184860 107 ntBASIC18.91■□□□□ 0.62
Tcof1O08784 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.91■□□□□ 0.62
Tcof1O08784 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tcof1O08784 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tcof1O08784 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcof1O08784 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.91■□□□□ 0.62
Tcof1O08784 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tcof1O08784 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.9■□□□□ 0.62
Tcof1O08784 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tcof1O08784 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.9■□□□□ 0.62
Tcof1O08784 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.9■□□□□ 0.62
Tcof1O08784 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tcof1O08784 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tcof1O08784 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.9■□□□□ 0.62
Tcof1O08784 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tcof1O08784 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms