Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Raet1aO08602 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Raet1aO08602 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.38□□□□□ -0.11
Raet1aO08602 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Raet1aO08602 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Raet1aO08602 Mir770-201ENSMUST00000103252 94 ntBASIC14.38□□□□□ -0.11
Raet1aO08602 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Gm9013-201ENSMUST00000132939 882 ntBASIC14.38□□□□□ -0.11
Raet1aO08602 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.38□□□□□ -0.11
Raet1aO08602 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.38□□□□□ -0.11
Raet1aO08602 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Raet1aO08602 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.38□□□□□ -0.11
Raet1aO08602 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Raet1aO08602 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Raet1aO08602 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Raet1aO08602 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.37□□□□□ -0.11
Raet1aO08602 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Raet1aO08602 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Raet1aO08602 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Raet1aO08602 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Raet1aO08602 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Raet1aO08602 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Raet1aO08602 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Raet1aO08602 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Raet1aO08602 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Raet1aO08602 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.36□□□□□ -0.11
Raet1aO08602 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Raet1aO08602 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.36□□□□□ -0.11
Raet1aO08602 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.36□□□□□ -0.11
Raet1aO08602 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Raet1aO08602 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.36□□□□□ -0.11
Raet1aO08602 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Raet1aO08602 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.36□□□□□ -0.11
Raet1aO08602 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raet1aO08602 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Raet1aO08602 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raet1aO08602 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms