Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34bJ3QNR8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Gm11780-201ENSMUST00000136880 516 ntBASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Gm6089-201ENSMUST00000197666 938 ntBASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim34bJ3QNR8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim34bJ3QNR8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34bJ3QNR8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.75■□□□□ 0.75
Trim34bJ3QNR8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34bJ3QNR8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Gm6550-201ENSMUST00000187574 993 ntBASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms