Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Gm5277-201ENSMUST00000164923 556 ntBASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-1G3UXB3 Gm42736-201ENSMUST00000200723 1353 ntBASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-1G3UXB3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm36982-201ENSMUST00000193796 1128 ntBASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm9794-201ENSMUST00000202370 423 ntBASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Gm37863-201ENSMUST00000194911 1457 ntBASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-1G3UXB3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm7774-201ENSMUST00000200064 533 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm45167-201ENSMUST00000208007 322 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm42479-201ENSMUST00000198654 1356 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm42852-201ENSMUST00000202649 1379 ntBASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-1G3UXB3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm13255-201ENSMUST00000117255 547 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm14739-201ENSMUST00000120424 802 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm12151-201ENSMUST00000121374 290 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm45612-201ENSMUST00000211320 160 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm45925-201ENSMUST00000218882 744 ntBASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-1G3UXB3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms