Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh1F7BJK1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Timm23-208ENSMUST00000226683 750 ntBASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh1F7BJK1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 App-207ENSMUST00000227737 2827 ntBASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh1F7BJK1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh1F7BJK1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms