Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc1E9PZP8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc1E9PZP8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc1E9PZP8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc1E9PZP8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc1E9PZP8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm11185-201ENSMUST00000117732 1007 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm9172-201ENSMUST00000212092 954 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm42612-201ENSMUST00000197986 623 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm43170-201ENSMUST00000199827 612 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm18622-201ENSMUST00000219361 595 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Gm27892-201ENSMUST00000185017 106 ntBASIC9.05□□□□□ -0.96
Herc1E9PZP8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc1E9PZP8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gm29667-201ENSMUST00000190817 490 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Mir5132-201ENSMUST00000175166 71 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gm17420-201ENSMUST00000164753 153 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC9.04□□□□□ -0.96
Herc1E9PZP8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc1E9PZP8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Herc1E9PZP8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm24526-201ENSMUST00000082921 158 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm15808-201ENSMUST00000119046 604 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm27533-201ENSMUST00000183800 152 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm13015-201ENSMUST00000118674 204 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms