Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Gm22175-201ENSMUST00000175007 78 ntBASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Mir6977-201ENSMUST00000184960 64 ntBASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Scaf11E9PZM7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Gm9682-201ENSMUST00000197505 556 ntBASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Gm11620-201ENSMUST00000118770 1845 ntBASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Scaf11E9PZM7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC22.46■■□□□ 1.19
Scaf11E9PZM7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Gm18889-201ENSMUST00000174284 929 ntBASIC22.46■■□□□ 1.19
Scaf11E9PZM7 H2-Pa-201ENSMUST00000182803 626 ntBASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scaf11E9PZM7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Gm27437-201ENSMUST00000183429 107 ntBASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC22.45■■□□□ 1.18
Scaf11E9PZM7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Scaf11E9PZM7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Mir449b-201ENSMUST00000104833 80 ntBASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scaf11E9PZM7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm4609-201ENSMUST00000106443 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm5138-201ENSMUST00000113842 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm15191-201ENSMUST00000117933 1000 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm12182-201ENSMUST00000118655 1008 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm13882-201ENSMUST00000120886 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm10284-201ENSMUST00000145057 1005 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm10481-201ENSMUST00000179228 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm2574-201ENSMUST00000181051 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm3200-201ENSMUST00000181493 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm4518-201ENSMUST00000182638 718 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm8330-201ENSMUST00000182754 1008 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm4575-201ENSMUST00000182991 1002 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Gm8709-201ENSMUST00000183230 1012 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 AC125206.2-201ENSMUST00000217454 574 ntBASIC22.43■■□□□ 1.18
Scaf11E9PZM7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms