Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pcdh17E9PXF0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Gm15165-201ENSMUST00000118140 502 ntBASIC15.05■□□□□ -0
Pcdh17E9PXF0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Gm44454-201ENSMUST00000198541 138 ntBASIC15.05■□□□□ -0
Pcdh17E9PXF0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh17E9PXF0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Gm27867-201ENSMUST00000184778 125 ntBASIC15.04■□□□□ -0
Pcdh17E9PXF0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.04■□□□□ -0
Pcdh17E9PXF0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.04■□□□□ -0
Pcdh17E9PXF0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh17E9PXF0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh17E9PXF0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms