Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28043E0CXC2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Gm13559-201ENSMUST00000120476 863 ntBASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28043E0CXC2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Gm28043E0CXC2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Gm28043E0CXC2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Gm28043E0CXC2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms