Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.47□□□□□ -0.09
Shank1D3YZU1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.47□□□□□ -0.09
Shank1D3YZU1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.47□□□□□ -0.09
Shank1D3YZU1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.47□□□□□ -0.09
Shank1D3YZU1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.47□□□□□ -0.09
Shank1D3YZU1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.47□□□□□ -0.09
Shank1D3YZU1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Mir8117-201ENSMUST00000184773 107 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Gm27321-201ENSMUST00000185021 205 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.46□□□□□ -0.09
Shank1D3YZU1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Shank1D3YZU1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Shank1D3YZU1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.46□□□□□ -0.1
Shank1D3YZU1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.46□□□□□ -0.1
Shank1D3YZU1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shank1D3YZU1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.45□□□□□ -0.1
Shank1D3YZU1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Gm11764-201ENSMUST00000120221 623 ntBASIC14.45□□□□□ -0.1
Shank1D3YZU1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shank1D3YZU1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Gm7222-201ENSMUST00000117512 906 ntBASIC14.44□□□□□ -0.1
Shank1D3YZU1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms