Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.18■□□□□ 0.34
Rfx8D3YU81 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx8D3YU81 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.17■□□□□ 0.34
Rfx8D3YU81 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Gm33142-201ENSMUST00000193913 867 ntBASIC17.17■□□□□ 0.34
Rfx8D3YU81 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.17■□□□□ 0.34
Rfx8D3YU81 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx8D3YU81 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Gm10052-201ENSMUST00000168019 960 ntBASIC17.16■□□□□ 0.34
Rfx8D3YU81 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Gm7729-201ENSMUST00000050143 801 ntBASIC17.16■□□□□ 0.34
Rfx8D3YU81 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx8D3YU81 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx8D3YU81 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfx8D3YU81 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms