Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3lB2RV38 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gm7638-201ENSMUST00000121348 967 ntBASIC14.15□□□□□ -0.14
Rd3lB2RV38 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gm8520-201ENSMUST00000186517 868 ntBASIC14.15□□□□□ -0.14
Rd3lB2RV38 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3lB2RV38 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rd3lB2RV38 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.14□□□□□ -0.15
Rd3lB2RV38 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.14□□□□□ -0.15
Rd3lB2RV38 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.14□□□□□ -0.15
Rd3lB2RV38 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rd3lB2RV38 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Gm38027-201ENSMUST00000192315 235 ntBASIC14.13□□□□□ -0.15
Rd3lB2RV38 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3lB2RV38 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms