Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scn7aB1AYL1 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Gm45612-201ENSMUST00000211320 160 ntBASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn7aB1AYL1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scn7aB1AYL1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Gm45747-201ENSMUST00000212203 999 ntBASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.77■□□□□ 0.92
Scn7aB1AYL1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Gm18246-201ENSMUST00000221023 728 ntBASIC20.77■□□□□ 0.91
Scn7aB1AYL1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Gm44492-201ENSMUST00000197012 141 ntBASIC20.76■□□□□ 0.91
Scn7aB1AYL1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.76■□□□□ 0.91
Scn7aB1AYL1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn7aB1AYL1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Gm27494-201ENSMUST00000184735 189 ntBASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn7aB1AYL1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn7aB1AYL1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn7aB1AYL1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn7aB1AYL1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn7aB1AYL1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms