Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 App-207ENSMUST00000227737 2827 ntBASIC13.17□□□□□ -0.3
Gm12887B1AVM1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm12887B1AVM1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Dio3-201ENSMUST00000097228 1449 ntBASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Mir5133-201ENSMUST00000174955 77 ntBASIC13.16□□□□□ -0.3
Gm12887B1AVM1 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm12887B1AVM1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm12887B1AVM1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gm12887B1AVM1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms