Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.21□□□□□ -0.46
Col6a5A6H584 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.21□□□□□ -0.46
Col6a5A6H584 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.21□□□□□ -0.46
Col6a5A6H584 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a5A6H584 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.2□□□□□ -0.46
Col6a5A6H584 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Gm13829-201ENSMUST00000119600 138 ntBASIC12.2□□□□□ -0.46
Col6a5A6H584 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Mir3102-201ENSMUST00000175555 104 ntBASIC12.2□□□□□ -0.46
Col6a5A6H584 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col6a5A6H584 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a5A6H584 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a5A6H584 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.19□□□□□ -0.46
Col6a5A6H584 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.19□□□□□ -0.46
Col6a5A6H584 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col6a5A6H584 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a5A6H584 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.19□□□□□ -0.46
Col6a5A6H584 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a5A6H584 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Gm7488-201ENSMUST00000117148 684 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Mir8102-201ENSMUST00000184148 139 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Gm10253-201ENSMUST00000194270 940 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 AY702102-202ENSMUST00000194651 1173 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.18□□□□□ -0.46
Col6a5A6H584 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a5A6H584 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.18□□□□□ -0.46
Col6a5A6H584 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 BC021767-201ENSMUST00000126387 1716 ntBASIC12.17□□□□□ -0.46
Col6a5A6H584 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Thap2-203ENSMUST00000218989 527 ntBASIC12.17□□□□□ -0.46
Col6a5A6H584 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms