Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Dio3-201ENSMUST00000097228 1449 ntBASIC16.49■□□□□ 0.23
Gm5640A3KG49 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.49■□□□□ 0.23
Gm5640A3KG49 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Gm12382-201ENSMUST00000122005 922 ntBASIC16.48■□□□□ 0.23
Gm5640A3KG49 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.48■□□□□ 0.23
Gm5640A3KG49 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Gm5640A3KG49 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.47■□□□□ 0.23
Gm5640A3KG49 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm5640A3KG49 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.46■□□□□ 0.23
Gm5640A3KG49 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.46■□□□□ 0.23
Gm5640A3KG49 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5640A3KG49 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5640A3KG49 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5640A3KG49 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5640A3KG49 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.45■□□□□ 0.22
Gm5640A3KG49 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm5640A3KG49 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5640A3KG49 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
Gm5640A3KG49 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms