Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Gm13036-201ENSMUST00000117799 748 ntBASIC16.92■□□□□ 0.3
Scn1aA2APX8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.92■□□□□ 0.3
Scn1aA2APX8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.91■□□□□ 0.3
Scn1aA2APX8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.91■□□□□ 0.3
Scn1aA2APX8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.91■□□□□ 0.3
Scn1aA2APX8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn1aA2APX8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.9■□□□□ 0.3
Scn1aA2APX8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm7230-201ENSMUST00000173026 815 ntBASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.9■□□□□ 0.3
Scn1aA2APX8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.9■□□□□ 0.3
Scn1aA2APX8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn1aA2APX8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.89■□□□□ 0.29
Scn1aA2APX8 Gm44771-201ENSMUST00000206975 626 ntBASIC16.89■□□□□ 0.29
Scn1aA2APX8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms