Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Rpph1-201ENSMUST00000175096 319 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm18622-201ENSMUST00000219361 595 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 AC093022.1-201ENSMUST00000226949 1072 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm6407-201ENSMUST00000176468 549 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm5035-201ENSMUST00000215581 927 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gpr146-202ENSMUST00000053120 1040 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm27680-201ENSMUST00000184192 160 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm28630-201ENSMUST00000187806 498 ntBASIC8.51□□□□□ -1.05
Ubr4A2AN08 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ubr4A2AN08 Gm11185-201ENSMUST00000117732 1007 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm24526-201ENSMUST00000082921 158 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm10616-201ENSMUST00000205285 2127 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm18057-201ENSMUST00000208220 503 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm43289-201ENSMUST00000200537 1475 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ubr4A2AN08 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Gm6858-201ENSMUST00000208582 1468 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC8.5□□□□□ -1.05
Ubr4A2AN08 AC159896.2-201ENSMUST00000214753 269 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 AC154319.1-201ENSMUST00000216330 312 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 AL589735.1-201ENSMUST00000224353 270 ntBASIC8.5□□□□□ -1.05
Ubr4A2AN08 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gm9200-201ENSMUST00000118513 1354 ntBASIC8.49□□□□□ -1.05
Ubr4A2AN08 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms