Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Gm7370-201ENSMUST00000219471 767 ntBASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-1A0N8R1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-1A0N8R1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Gm13474-201ENSMUST00000122466 815 ntBASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Gm29707-201ENSMUST00000196325 491 ntBASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms