Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm13036-201ENSMUST00000117799 748 ntBASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm27702-201ENSMUST00000184512 56 ntBASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm27628-201ENSMUST00000184911 107 ntBASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm3854A0A1B0GSS6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm14140-201ENSMUST00000119999 995 ntBASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Gm3854A0A1B0GSS6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm7222-201ENSMUST00000117512 906 ntBASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm6736-201ENSMUST00000166583 948 ntBASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.17■□□□□ 0.18
Gm3854A0A1B0GSS6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm3854A0A1B0GSS6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm14494-201ENSMUST00000118786 435 ntBASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3854A0A1B0GSS6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.14■□□□□ 0.18
Gm3854A0A1B0GSS6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms