Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5580A0A0N4SVP8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Gm5580A0A0N4SVP8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm10566-201ENSMUST00000086739 996 ntBASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5580A0A0N4SVP8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 App-207ENSMUST00000227737 2827 ntBASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms