Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Phf7-203ENSMUST00000226565 1971 ntBASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav23A0A0G2JG17 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav23A0A0G2JG17 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav23A0A0G2JG17 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav23A0A0G2JG17 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Gm6345-202ENSMUST00000180900 204 ntBASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Gm37722-201ENSMUST00000193757 208 ntBASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav23A0A0G2JG17 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gm25016-201ENSMUST00000158399 131 ntBASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav23A0A0G2JG17 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav23A0A0G2JG17 Gm13186-201ENSMUST00000118031 316 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms