Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atg4a-psA0A0G2JFS9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Mir6404-201ENSMUST00000183699 94 ntBASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.66■□□□□ 0.74
Atg4a-psA0A0G2JFS9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms