Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm8495-201ENSMUST00000188740 694 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm5408-201ENSMUST00000197998 747 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm2559-201ENSMUST00000201323 363 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm4968-201ENSMUST00000071458 858 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm13148-201ENSMUST00000118892 745 ntBASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm15375-201ENSMUST00000119510 849 ntBASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm26571-201ENSMUST00000181399 666 ntBASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 399.7 ms