Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9-4A0A0B4J1K2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm10052-201ENSMUST00000168019 960 ntBASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm7729-201ENSMUST00000050143 801 ntBASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm7284-201ENSMUST00000131667 944 ntBASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms