Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm17807-201ENSMUST00000186869 298 ntBASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm21362-201ENSMUST00000194272 928 ntBASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms