Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm27011-201ENSMUST00000182352 972 ntBASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv1A0A0B4J1G7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm10517-202ENSMUST00000192970 758 ntBASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm10812-201ENSMUST00000099864 546 ntBASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv1A0A0B4J1G7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.73□□□□□ -0.37
Trbv1A0A0B4J1G7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms