Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh7A0A0A6YY83 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm13312-201ENSMUST00000119631 718 ntBASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm33142-201ENSMUST00000193913 867 ntBASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh7A0A0A6YY83 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm27742-201ENSMUST00000184667 60 ntBASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gm7977-201ENSMUST00000193787 748 ntBASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh7A0A0A6YY83 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh7A0A0A6YY83 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh7A0A0A6YY83 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms