Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbc1A0A0A6YWV4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm7284-201ENSMUST00000131667 944 ntBASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm21362-201ENSMUST00000194272 928 ntBASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm7367-201ENSMUST00000057611 492 ntBASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbc1A0A0A6YWV4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm27704-201ENSMUST00000185094 107 ntBASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbc1A0A0A6YWV4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbc1A0A0A6YWV4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms