Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm7638-201ENSMUST00000121348 967 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm12441-201ENSMUST00000121806 588 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm37856-201ENSMUST00000191634 999 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Prob1-201ENSMUST00000097619 3021 ntBASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms