Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.39
Trav16A0A075B653 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Gm11249-201ENSMUST00000117071 859 ntBASIC12.58□□□□□ -0.4
Trav16A0A075B653 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Gm12896-201ENSMUST00000118430 226 ntBASIC12.58□□□□□ -0.4
Trav16A0A075B653 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.58□□□□□ -0.4
Trav16A0A075B653 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16A0A075B653 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Prob1-201ENSMUST00000097619 3021 ntBASIC12.57□□□□□ -0.4
Trav16A0A075B653 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav16A0A075B653 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16A0A075B653 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms