Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm44450-201ENSMUST00000199528 114 ntBASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Odf3b-204ENSMUST00000227834 930 ntBASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-1A0A075B5Z8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav6-1A0A075B5Z8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-1A0A075B5Z8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Mir1199-201ENSMUST00000117015 119 ntBASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms