Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav5-1A0A075B5Z7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm27867-201ENSMUST00000184778 125 ntBASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm28659-201ENSMUST00000188013 759 ntBASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm9172-201ENSMUST00000212092 954 ntBASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Trav5-1A0A075B5Z7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Mir6404-201ENSMUST00000183699 94 ntBASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav5-1A0A075B5Z7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Mir8098-201ENSMUST00000184011 137 ntBASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav5-1A0A075B5Z7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms